That’s rather annoying message that I kept getting today while trying to install an MSI into a VM.  A quick Bing search showed a few people with this issue, most stating that you need to run the msi from the command line using MSIEXEC to work around...

VSDB provides a number of configuration properties that can be used during deployment. These options are found in the Database.sqldeployment file that is included in your database project: These options can also be specified on the command line...