A partner recently asked me the following question:
First please refer to the following SharePoint documentation on TechNet: Plan for software boundaries (Windows SharePoint Services)
Blog posts on the same subject:
Secondly, a work around is to use SQL Server Reporting Services to filter out the list based on custom fields: http://blogs.msdn.com/chrisfie/archive/2007/10/03/controlling-the-project-workspaces-list.aspx